From c77f9348a71e4c6b2b8b19ff83f4b86a7e8a6239 Mon Sep 17 00:00:00 2001 From: Navan Chauhan Date: Fri, 13 Mar 2020 18:33:58 +0530 Subject: Removed valproic acid files --- ChEBI_39867 (1).sdf | 115 --------------------------------------- valproic_acid_binding_energy.sdf | 32 ----------- valproic_acid_inding_energy.csv | 10 ---- 3 files changed, 157 deletions(-) delete mode 100644 ChEBI_39867 (1).sdf delete mode 100644 valproic_acid_binding_energy.sdf delete mode 100644 valproic_acid_inding_energy.csv diff --git a/ChEBI_39867 (1).sdf b/ChEBI_39867 (1).sdf deleted file mode 100644 index 80eff2c..0000000 --- a/ChEBI_39867 (1).sdf +++ /dev/null @@ -1,115 +0,0 @@ - -Mrv0541 12311313022D - - 10 9 0 0 0 0 999 V2000 - -1.7786 -7.7855 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 - -2.4930 -8.1979 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 - -3.2074 -7.7854 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 - -1.0641 -8.1980 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 - -1.0641 -9.0230 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 - -1.7785 -9.4355 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 - -1.7785 -10.2605 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 - -0.3496 -6.9605 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 - -0.3496 -7.7855 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 - 0.3649 -8.1980 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 - 9 4 1 0 0 0 0 - 4 1 1 0 0 0 0 - 1 2 1 0 0 0 0 - 2 3 1 0 0 0 0 - 4 5 1 0 0 0 0 - 5 6 1 0 0 0 0 - 6 7 1 0 0 0 0 - 9 8 2 0 0 0 0 - 9 10 1 0 0 0 0 -M END -> -CHEBI:39867 - -> -valproic acid - -> -A branched-chain saturated fatty acid that comprises of a propyl substituent on a pentanoic acid stem. - -> -3 - -> -CHEBI:9926; CHEBI:39858; CHEBI:115217 - -> -VPA; Valproinsaeure; VALPROIC ACID; n-DPA; DPA; dipropylacetic acid; Di-n-propylessigsaeure; di-n-propylacetic acid; 4-heptanecarboxylic acid; 2-propylvaleric acid; 2-propylpentanoic acid; 2-PROPYL-PENTANOIC ACID; 2-n-propyl-n-valeric acid - -> -2-propylpentanoic acid - -> -valproic acid; acidum valproicum; acido valproico; acide valproique - -> -Depakene - -> -C8H16O2 - -> -144.21140 - -> -144.11503 - -> -0 - -> -CCCC(CCC)C(O)=O - -> -InChI=1S/C8H16O2/c1-3-5-7(6-4-2)8(9)10/h7H,3-6H2,1-2H3,(H,9,10) - -> -NIJJYAXOARWZEE-UHFFFAOYSA-N - -> -1750447 - -> -99-66-1 - -> -1750447 - -> -99-66-1 - -> -DB00313 - -> -HMDB0001877 - -> -C07185 - -> -D00399 - -> -LSM-4620 - -> -LMFA01020291 - -> -99-66-1 - -> -2PP - -> -Valproic_Acid - -> -11716839; 12475192; 15124690; 15560954; 15578701; 16496131; 16621443; 16759735; 17156483; 17273758; 19280426; 19318486; 23792104; 23810771; 23949302; 24135375; 24200999; 24348849; 8558327; 8681902 - -$$$$ diff --git a/valproic_acid_binding_energy.sdf b/valproic_acid_binding_energy.sdf deleted file mode 100644 index 347be36..0000000 --- a/valproic_acid_binding_energy.sdf +++ /dev/null @@ -1,32 +0,0 @@ -6lu7cov_valproic_acid_0 - OpenBabel03022010313D - - 11 11 0 0 0 0 0 0 0 0999 V2000 - -35.1260 14.0100 54.2980 C 0 0 0 0 0 - -35.7440 14.5480 54.2110 C 0 0 0 0 0 - -36.5230 14.3020 54.3270 C 0 0 0 0 0 - -34.3460 14.2560 54.1810 C 0 0 0 0 0 - -34.1860 15.0390 53.9790 C 0 0 0 0 0 - -34.8060 15.5770 53.8920 C 0 0 0 0 0 - -34.6470 16.3620 53.6890 C 0 0 0 0 0 - -33.8870 12.9340 54.4710 O 0 0 0 0 0 - -33.7270 13.7170 54.2680 C 0 0 0 0 0 - -32.9480 13.9630 54.1520 O 0 0 0 0 0 - -32.7660 14.8530 53.9220 H 0 0 0 0 0 - 4 1 1 0 0 0 - 2 1 2 0 0 0 - 6 2 1 0 0 0 - 2 3 1 0 0 0 - 5 4 2 0 0 0 - 4 9 1 0 0 0 - 6 5 1 0 0 0 - 7 6 2 0 0 0 - 9 8 2 0 0 0 - 10 9 1 0 0 0 - 11 10 1 0 0 0 -M RAD 4 1 2 3 4 5 2 7 3 -M END -> --6.3 - -$$$$ diff --git a/valproic_acid_inding_energy.csv b/valproic_acid_inding_energy.csv deleted file mode 100644 index 5ee1df2..0000000 --- a/valproic_acid_inding_energy.csv +++ /dev/null @@ -1,10 +0,0 @@ -Ligand,Binding Affinity,rmsd/ub, rmsd/lb -6lu7cov_valproic_acid,-6.3,0.0,0.0 -6lu7cov_valproic_acid,-6.2,29.292,28.616 -6lu7cov_valproic_acid,-6.2,29.335,28.523 -6lu7cov_valproic_acid,-6.2,29.563,28.743 -6lu7cov_valproic_acid,-6.1,27.663,26.801 -6lu7cov_valproic_acid,-6.0,29.286,28.436 -6lu7cov_valproic_acid,-5.8,16.768,16.696 -6lu7cov_valproic_acid,-5.7,17.007,16.537 -6lu7cov_valproic_acid,-5.6,23.538,23.074 -- cgit v1.2.3