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authorNavan Chauhan <navanchauhan@gmail.com>2020-10-03 19:11:04 +0530
committerNavan Chauhan <navanchauhan@gmail.com>2020-10-03 19:11:04 +0530
commit6fe0c3114b33471ae640ec5887f77b2ba33cc35c (patch)
treeec5705c93d18b7958931b451df06cfde01ee42b9 /app/scripts/get_dock_score.py
parente300d53d0d7877680fb0eeb2a8d5bcce3d6529e1 (diff)
added title,date to pdf
Diffstat (limited to 'app/scripts/get_dock_score.py')
-rw-r--r--app/scripts/get_dock_score.py10
1 files changed, 7 insertions, 3 deletions
diff --git a/app/scripts/get_dock_score.py b/app/scripts/get_dock_score.py
index c8b87d5..c4cc30d 100644
--- a/app/scripts/get_dock_score.py
+++ b/app/scripts/get_dock_score.py
@@ -1,5 +1,5 @@
#!/usr/bin/python3
-
+from datetime import datetime
import argparse
parser = argparse.ArgumentParser(description="Get Docking Score")
@@ -21,7 +21,11 @@ ligand = args.ligand
from os.path import basename
-print("# " + str(basename(protein)).replace(".pdbqt","") + "-" + str(basename(ligand)).replace("_out.pdbqt",""), end="\n\n")
+print("% Molecular Docking of " + str(basename(ligand)).replace("_out.pdbqt","") + " with " +str(basename(protein)).replace(".pdbqt",""))
+print("%")
+print("% " + str(datetime.now().strftime("%b %d, %Y")))
+
+print("![Structure of %s](compound.svg)"%(str(basename(ligand)).replace("_out.pdbqt","")),end="\n\n")
from tabulate import tabulate
@@ -41,6 +45,6 @@ for line in lines:
if ta != []:
results.append(ta)
-print("## Docking Scores",end="\n\n")
+print("# Docking Score",end="\n\n")
print(tabulate(results,headers=["No.","Affinity","rmsd l.b","rmsd u.b"]))
print("",end="\n\n")