added active link for all pages to navbar

added dropdowns
removed starter files
removed sentry completely

15 files changed, 45 insertions, 60 deletions

diff --git a/app/templates/about.html b/app/templates/about.html
index b61bfed..c360003 100644
--- a/app/templates/about.html
+++ b/app/templates/about.html
@@ -1,5 +1,5 @@
 {% extends 'base.html' %}
-
+{% set active_page = "about" %}
 {% block main %}
     <h1>About Curie Web</h1>
     <p>Curie Web is a web interface for my private Python Library called "Curie", with some aditional superpowers.</p>
diff --git a/app/templates/base.html b/app/templates/base.html
index 2e79a61..f92d59d 100644
--- a/app/templates/base.html
+++ b/app/templates/base.html
@@ -23,30 +23,47 @@
       </button>
       <div class="collapse navbar-collapse" id="navbarNav">
         <ul class="navbar-nav">
-          <li class="nav-item active">
+          <li class="{{ 'nav-item active' if active_page == 'home' else 'nav-item' }}">
             <a class="nav-link" href="{{ url_for('home') }}">Home <span class="sr-only">(current)</span></a>
           </li>
-          <li class="nav-item">
+          <li class="{{ 'nav-item active' if active_page == 'about' else 'nav-item' }}">
             <a class="nav-link" href="{{ url_for('about') }}">About</a>
           </li>
-          <!--
-          <li class="nav-item">
-            <a class="nav-link" href="{{ url_for('basic_form') }}">Basic Form</a>
+          <li class="{{ 'nav-item dropdown active' if active_page == 'dock' else 'nav-item dropdown' }}">
+            <a class="nav-link dropdown-toggle" href="#" id="navbarDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false">
+              Dock and Report
+            </a>
+            <div class="dropdown-menu" aria-labelledby="navbarDropdown">
+              <a class="dropdown-item" href="{{ url_for('dock_upload') }}">Automatic</a>
+              <a class="dropdown-item" href="{{ url_for('dock_upload_single') }}">Manual</a>
+            </div>
           </li>
-          <li class="nav-item">
-            <a class="nav-link" href="{{ url_for('wtform') }}">WTForms</a>
-          </li> -->
-          <li class="nav-item">
-            <a class="nav-link" href="{{ url_for('dock_upload') }}">Dock and Report</a>
-          </li>
-          <li class="nav-item">
+          <li class="{{ 'nav-item active' if active_page == 'generate' else 'nav-item' }}">
             <a class="nav-link" href="{{ url_for('generate') }}">Generate</a>
           </li>
-          <li class="nav-item">
-            <a class="nav-link" href="{{ url_for('status') }}">Job Status</a>
+          <li class="{{ 'nav-item dropdown active' if active_page == 'search' else 'nav-item dropdown' }}">
+            <a class="nav-link dropdown-toggle" href="#" id="navbarDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false">
+              Research
+            </a>
+            <div class="dropdown-menu" aria-labelledby="navbarDropdown">
+              <a class="dropdown-item" href="{{url_for('pubmed')}}">PubMed</a>
+              <a class="dropdown-item" href="{{url_for('pubchem')}}">PubChem</a>
+              <div class="dropdown-divider"></div>
+              <a class="dropdown-item disabled" href="#">Qrious</a>
+            </div>
           </li>
-          <li class="nav-item">
-            <a class="nav-link" href="{{url_for('pubmed')}}">Search</a>
+          <li class="{{ 'nav-item dropdown active' if active_page == 'tool' else 'nav-item dropdown' }}">
+            <a class="nav-link dropdown-toggle" href="#" id="navbarDropdown" role="button" data-toggle="dropdown" aria-haspopup="true" aria-expanded="false">
+              Other Tools
+            </a>
+            <div class="dropdown-menu" aria-labelledby="navbarDropdown">
+              <a class="dropdown-item" href="{{url_for('generate_pdbqts')}}">Generate PDBQTs</a>
+              <a class="dropdown-item" href="{{url_for('editor')}}">Molecule Editor</a>
+              <a class="dropdown-item" href="{{url_for('visualise')}}">Molecule Visualiser</a>
+            </div>
+          </li>
+          <li class="{{ 'nav-item active' if active_page == 'job_status' else 'nav-item' }}">
+            <a class="nav-link" href="{{ url_for('status') }}">Job Status</a>
           </li>
         </ul>
       </div>
diff --git a/app/templates/display_photo.html b/app/templates/display_photo.html
deleted file mode 100644
index 413e2e1..0000000
--- a/app/templates/display_photo.html
+++ /dev/null
@@ -1,7 +0,0 @@
-{% extends 'base.html' %}
-
-{% block main %}
-    <h2>Description: {{ description }}</h2>
-    <p>Succesfuly Submitted</p>
-    <!-- <img src="{{ url_for('static', filename="uploads/" + filename) }}" /> -->
-{% endblock %}
\ No newline at end of file
diff --git a/app/templates/display_result.html b/app/templates/display_result.html
deleted file mode 100644
index 0174637..0000000
--- a/app/templates/display_result.html
+++ /dev/null
@@ -1,8 +0,0 @@
-{% extends 'base.html' %}
-
-{% block main %}
-    <h2>Job ID: {{ job }}</h2>
-    <p>Succesfuly Submitted</p>
-    <b>Description: </b>{{description}}
-    <!-- <img src="{{ url_for('static', filename="uploads/" + filename) }}" /> -->
-{% endblock %}
\ No newline at end of file
diff --git a/app/templates/dock_upload.html b/app/templates/dock_upload.html
index 26f1e99..43dcd63 100644
--- a/app/templates/dock_upload.html
+++ b/app/templates/dock_upload.html
@@ -1,5 +1,5 @@
 {% extends 'base.html' %}
-
+{% set active_page = "dock" %}
 {% block main %}
     <h2>Enter Your Configuration</h2>
     <form action="{{ url_for('dock_upload') }}" method="post" enctype="multipart/form-data">
diff --git a/app/templates/dock_upload_single.html b/app/templates/dock_upload_single.html
index 882675c..5329972 100644
--- a/app/templates/dock_upload_single.html
+++ b/app/templates/dock_upload_single.html
@@ -1,5 +1,5 @@
 {% extends 'base.html' %}
-
+{% set active_page = "dock" %}
 {% block main %}
     <h2>Enter Your Configuration</h2>
     <form action="{{ url_for('dock_upload_single') }}" method="post" enctype="multipart/form-data">
diff --git a/app/templates/generate.html b/app/templates/generate.html
index 629a2a3..7e6808d 100644
--- a/app/templates/generate.html
+++ b/app/templates/generate.html
@@ -1,5 +1,5 @@
 {% extends 'base.html' %}
-
+{% set active_page = "generate" %}
 {% block main %}
     <h1>Curie Generate</h1>
     <p>The model {{expName}} has been trained for {{epochs}} epochs using the {{optimizer}} optimization algorithm. Option for finetuning coming soon.</p>
diff --git a/app/templates/home.html b/app/templates/home.html
index 14b5f71..1f7f9e5 100644
--- a/app/templates/home.html
+++ b/app/templates/home.html
@@ -1,4 +1,5 @@
 {% extends 'base.html' %}
+{% set active_page = "home" %}
 
 {% block main %}
     <h2>Curie Web Demo</h2>
diff --git a/app/templates/job_status.html b/app/templates/job_status.html
index 97ce9b3..446d46a 100644
--- a/app/templates/job_status.html
+++ b/app/templates/job_status.html
@@ -1,5 +1,7 @@
 {% extends 'base.html' %}
 
+{% set active_page = "job_status" %}
+
 {% block main %}
     <h2>Job ID: {{ ID }}</h2>
     <b>Submitted On: </b>{{subDate}}<br>
diff --git a/app/templates/molecule_editor.html b/app/templates/molecule_editor.html
index 22d8481..2a8eab3 100644
--- a/app/templates/molecule_editor.html
+++ b/app/templates/molecule_editor.html
@@ -1,5 +1,5 @@
 {% extends 'base.html' %}
-
+{% set active_page = "tool" %}
 {% block main %}
 
 <h2>Molecule Editor</h2>
diff --git a/app/templates/pdbqt_form.html b/app/templates/pdbqt_form.html
index 09cd1b0..af1bb37 100644
--- a/app/templates/pdbqt_form.html
+++ b/app/templates/pdbqt_form.html
@@ -1,6 +1,6 @@
 
 {% extends 'base.html' %}
-
+{% set active_page = "tool" %}
 {% block main %}
     <h2>Generate PDBQTs</h2>
 
diff --git a/app/templates/search-pubchem.html b/app/templates/search-pubchem.html
index 9b8e7cb..d9f0c2b 100644
--- a/app/templates/search-pubchem.html
+++ b/app/templates/search-pubchem.html
@@ -1,5 +1,5 @@
 {% extends 'base.html' %}
-
+{% set active_page = "search" %}
 {% block main %}
     <h1>SMILES Search</h1>
     <p>Get Compound SMILES through PubChem.</p>
diff --git a/app/templates/search.html b/app/templates/search.html
index 1faf151..b2cdfdc 100644
--- a/app/templates/search.html
+++ b/app/templates/search.html
@@ -1,5 +1,5 @@
 {% extends 'base.html' %}
-
+{% set active_page = "search" %}
 {% block main %}
     <h1>Curie Search</h1>
     <p>Search PubMed articles.</p>
diff --git a/app/templates/visualise.html b/app/templates/visualise.html
index 67c3a1c..f1bb068 100644
--- a/app/templates/visualise.html
+++ b/app/templates/visualise.html
@@ -1,5 +1,5 @@
 {% extends 'base.html' %}
-
+{% set active_page = "tool" %}
 {% block main %}
     <h1>Curie Visualise</h1>
     <p>placeholder uwu</p>
diff --git a/app/templates/wtform.html b/app/templates/wtform.html
deleted file mode 100644
index 6d9add5..0000000
--- a/app/templates/wtform.html
+++ /dev/null
@@ -1,20 +0,0 @@
-{% extends 'base.html' %}
-
-{% block main %}
-    <h2>WTForms in Flask</h2>
-    <p>Here we are using the Flask-WTF library to create and process a form. Flask-WTF also comes with CSRF protection and validation classes.</p>
-    <form method="post" action="{{ url_for('wtform') }}">
-        {% include 'flash_messages.html' %}
-        {{ form.csrf_token }}
-        <div class="form-group">
-            {{ form.firstname.label }} {{ form.firstname(class="form-control") }}
-        </div>
-        <div class="form-group">
-            {{ form.lastname.label }} {{ form.lastname(class="form-control") }}
-        </div>
-        <div class="form-group">
-            {{ form.email.label }} {{ form.email(class="form-control", placeholder="jdoe@example.com") }}
-        </div>
-    <button type="submit" class="btn btn-primary">Submit</button>
-</form>
-{% endblock %}
\ No newline at end of file