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diff --git a/app/templates/home.html b/app/templates/home.html index 2e9b7c0..f8e08da 100644 --- a/app/templates/home.html +++ b/app/templates/home.html @@ -1,4 +1,5 @@ {% extends 'base.html' %} +{% set active_page = "home" %} {% block main %} <h2>Curie Web Demo</h2> @@ -6,8 +7,8 @@ <p>The following are the currently active modules</p> <h3>Docking</h3> <ul> - <li><a href="{{ url_for('dock_upload') }}">Dock and Report (Manual)</a> - You can enter your AutoDock Vina configuration, upload the PDBQT files and it will perform the molecular docking and generate a PDF with proper visualisations and protein-interaction profillings (Using PLIP) </li> - <li><a href="{{ url_for('dock_upload_single') }}">Dock and Report (Automatic)</a> - You just enter in the PDB Code, target compound's SMILES structure and name, it will automatically find a binding location and then perform docking and report generation</li> + <li><a href="{{ url_for('dock_manual') }}">Dock and Report (Manual)</a> - You can enter your AutoDock Vina configuration, upload the PDBQT files and it will perform the molecular docking and generate a PDF with proper visualisations and protein-interaction profillings (Using PLIP) </li> + <li><a href="{{ url_for('dock_automatic') }}">Dock and Report (Automatic)</a> - You just enter in the PDB Code, target compound's SMILES structure and name, it will automatically find a binding location and then perform docking and report generation</li> </ul> <h3>Drug Designing</h3> @@ -18,6 +19,7 @@ <h3>Researching</h3> <ul> <li><a href="{{ url_for('pubmed') }}">PubMed Search</a> - Handy PubMed search with direct download links</li> + <li><a href="{{url_for('pubchem')}}">PubChem Search</a> - Get Compound SMILES</li> <li>Qrious App - You can enter a question for a set of papers (e.g. ChemRxiv preprints) and it uses AI to answer it for each individual paper based on their abstract</li> </ul> @@ -29,5 +31,32 @@ <li><a href="{{ url_for('status')}}">Job Status</a> - Check the job status </li> <li><a href="{{ url_for('visualise')}}">Visualise</a> - Molecular Viewer </li> </ul> - <img src="{{url_for('static',filename='assets/workingInALaboratory.svg')}}" /> + <section> + <h2>Credits</h2> + <blockquote class="blockquote"> + <q class="mb-0">If I have seen further it is by standing on the shoulders of Giants.</q> + <footer class="blockquote-footer">Sir Isaac Newton in <cite title="Source Title"> Letter from Sir Isaac Newton to Robert Hooke</cite></footer> + </blockquote> + This project would not have been possible without the following: + <br><br> + <h2><img src="{{url_for('static',filename='assets/pliplogo.svg')}}" alt="Logo of PLIP" width=100vw /> PLIP</h2> + + <ul> + <li>PLIP is used for binding site analysis, interaction detection and visualisations.</li> + <li>PLIP is powered by <a href="https://www.pharm.ai">PharmAI.</a></li> + </ul> + + <h2>AutoDock Vina</h2> + <ul> + <li>AutoDock Vina is an open-source program for doing molecular docking. It was designed and implemented by Dr. Oleg Trott in the Molecular Graphics Lab at The Scripps Research Institute.</li> + </ul> + + <h2>PyMOL</h2> + <ul> + <li>PyMOL is used for generating visualisations of protein-ligand complexes</li> + <li>PyMOL is a user-sponsored molecular visualization system on an open-source foundation, maintained and distributed by <a href="https://www.schrodinger.com">Schrödinger.</a></li> + </ul> + + </section> + <img src="{{url_for('static',filename='assets/workingInALaboratory.svg')}}" alt="Scientist working in a laboratory" /> {% endblock %}
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