diff options
Diffstat (limited to 'app/views.py')
| -rw-r--r-- | app/views.py | 41 |
1 files changed, 36 insertions, 5 deletions
diff --git a/app/views.py b/app/views.py index 03e74f4..39db678 100644 --- a/app/views.py +++ b/app/views.py @@ -12,10 +12,11 @@ from string import digits, ascii_lowercase from pymed import PubMed from datetime import datetime import json +import subprocess # Note: that when using Flask-WTF we need to import the Form Class that we created # in forms.py -from .forms import MyForm, curieForm, statusForm, generateSMILES, PyMedSearch +from .forms import MyForm, curieForm, statusForm, generateSMILES, PyMedSearch, dockSingleForm def gen_word(N, min_N_dig, min_N_low): choose_from = [digits]*min_N_dig + [ascii_lowercase]*min_N_low @@ -30,7 +31,6 @@ def convertToBinaryData(filename): binaryData = file.read() return binaryData - ### # Routing for your application. ### @@ -99,7 +99,6 @@ def status(): flash_errors(taskStatusForm) return render_template('job_status_form.html',form=taskStatusForm) - @app.route('/basic-form', methods=['GET', 'POST']) def basic_form(): if request.method == 'POST': @@ -114,7 +113,6 @@ def basic_form(): return render_template('form.html') - @app.route('/wtform', methods=['GET', 'POST']) def wtform(): myform = MyForm() @@ -133,7 +131,7 @@ def wtform(): flash_errors(myform) return render_template('wtform.html', form=myform) -tfWorking = -1 +tfWorking = 0 if tfWorking == -1: try: @@ -218,6 +216,39 @@ def dock_upload(): flash_errors(form) return render_template('dock_upload.html', form=form) +@app.route('/Dock-Single', methods=['GET', 'POST']) +def dock_upload_single(): + form = dockSingleForm() + + if request.method == 'POST' and form.validate_on_submit(): + print("Recieved task: ",form.description.data) + description = form.description.data + pdb = form.pdbID.data + smile = form.smiles.data + name = form.name.data + email = form.email.data + + import mysql.connector as con + mycon = con.connect(host=app.config['DB_HOST'],user=app.config['DB_USER'],password=app.config['DB_PASSWORD'],port=app.config['DB_PORT'],database=app.config['DB_NAME']) + mycursor = mycon.cursor() + + sqlQuery = "insert into curieweb (id, email, pdb, ligand_smile, ligand_name, date, description) values (%s,%s,%s,%s,%s,CURDATE(),%s) " + jobID = gen_word(16, 1, 1) + + insert_tuple = (jobID,email,pdb,smile,name,description) + mycursor.execute(sqlQuery,insert_tuple) + mycon.commit() + + print("Description",description) + + cwd = os.path.join(os.getcwd(),"app") + subprocess.Popen(['python3', 'dock-single.py'],cwd=cwd) + + return render_template('display_result.html', filename="OwO", description=description,job=jobID) + + flash_errors(form) + return render_template('dock_upload_single.html', form=form) + ### # The functions below should be applicable to all Flask apps. ### |