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-rw-r--r--plip/test/test_water_bridges.py20
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diff --git a/plip/test/test_water_bridges.py b/plip/test/test_water_bridges.py
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+++ b/plip/test/test_water_bridges.py
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+import unittest
+
+from plip.structure.preparation import PDBComplex, PLInteraction
+
+
+def characterize_complex(pdb_file: str, binding_site_id: str) -> PLInteraction:
+ pdb_complex = PDBComplex()
+ pdb_complex.load_pdb(pdb_file)
+ for ligand in pdb_complex.ligands:
+ if ':'.join([ligand.hetid, ligand.chain, str(ligand.position)]) == binding_site_id:
+ pdb_complex.characterize_complex(ligand)
+ return pdb_complex.interaction_sets[binding_site_id]
+
+
+class WaterBridgeTest(unittest.TestCase):
+
+ def test_3ems(self):
+ interactions = characterize_complex('./pdb/3ems.pdb', 'ARG:A:131')
+ water_bridges = interactions.water_bridges
+ self.assertEqual(len(water_bridges), 4)