import unittest from plip.basic import config from plip.structure.preparation import PDBComplex, PLInteraction def characterize_complex(pdb_file: str, binding_site_id: str) -> PLInteraction: pdb_complex = PDBComplex() pdb_complex.load_pdb(pdb_file) for ligand in pdb_complex.ligands: if ':'.join([ligand.hetid, ligand.chain, str(ligand.position)]) == binding_site_id: pdb_complex.characterize_complex(ligand) return pdb_complex.interaction_sets[binding_site_id] class RingDetectionTest(unittest.TestCase): def test_consistent_ring_detection(self): config.NOHYDRO = True angles = set() for i in range(0, 10): interactions = characterize_complex('./pdb/4dst_protonated.pdb', 'GCP:A:202') angles.add(interactions.pistacking[0].angle) self.assertTrue(len(angles) == 1) config.NOHYDRO = False