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| author | Navan Chauhan <navanchauhan@gmail.com> | 2024-03-27 22:50:25 -0600 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2024-03-27 22:50:25 -0600 |
| commit | 721c68798ec957b7874ebe8b0525b20375f8ce37 (patch) | |
| tree | b2813c98907fc7268252f0ab038ed92c812f7a89 /docs/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html | |
| parent | 9e620084e57378952c1a7f8e0a772ebebd18932b (diff) | |
| parent | 01ff93c9c16867216f2d249664803860e1d6d5eb (diff) | |
Merge pull request #18 from navanchauhan/hyde-theme-port
Hyde theme port
Diffstat (limited to 'docs/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html')
| -rw-r--r-- | docs/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html | 55 |
1 files changed, 37 insertions, 18 deletions
diff --git a/docs/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html b/docs/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html index 8126a04..b396ad6 100644 --- a/docs/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html +++ b/docs/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html @@ -2,14 +2,26 @@ <html lang="en"> <head> - <link rel="stylesheet" href="https://unpkg.com/latex.css/style.min.css" /> + <meta http-equiv="X-UA-Compatible" content="IE=edge"> + <meta http-equiv="content-type" content="text/html; charset=utf-8"> + <meta name="viewport" content="width=device-width, initial-scale=1.0, maximum-scale=1"> + + <title>Workflow for Lightning Fast Molecular Docking Part One</title> + + <!-- + <link rel="stylesheet" href="https://unpkg.com/latex.css/style.min.css" /> + --> + + <link rel="stylesheet" href="/assets/c-hyde.css" /> + + <link rel="stylesheet" href="http://fonts.googleapis.com/css?family=PT+Sans:400,400italic,700|Abril+Fatface"> + <link rel="stylesheet" href="/assets/main.css" /> <meta charset="utf-8"> <meta name="viewport" content="width=device-width, initial-scale=1.0"> - <title>Workflow for Lightning Fast Molecular Docking Part One</title> <meta name="og:site_name" content="Navan Chauhan" /> <link rel="canonical" href="https://web.navan.dev/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html" /> - <meta name="twitter:url" content="https://web.navan.dev/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html /> + <meta name="twitter:url" content="https://web.navan.dev/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html" /> <meta name="og:url" content="https://web.navan.dev/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL.html" /> <meta name="twitter:title" content="Workflow for Lightning Fast Molecular Docking Part One" /> <meta name="og:title" content="Workflow for Lightning Fast Molecular Docking Part One" /> @@ -29,21 +41,27 @@ <link rel="manifest" href="/manifest.json" /> </head> -<body> - <center><nav style="display: block;"> -| -<a href="/">home</a> | -<a href="/about/">about/links</a> | -<a href="/posts/">posts</a> | -<a href="/3D-Designs/">3D designs</a> | -<!--<a href="/publications/">publications</a> |--> -<!--<a href="/repo/">iOS repo</a> |--> -<a href="/feed.rss">RSS Feed</a> | -</nav> -</center> +<body class="theme-base-0d"> + <div class="sidebar"> + <div class="container sidebar-sticky"> + <div class="sidebar-about"> + <h1><a href="/">Navan</a></h1> + <p class="lead">Something Funny</p> + </div> + + <ul class="sidebar-nav"> + <li><a class="sidebar-nav-item" href="/about/">about/links</a></li> + <li><a class="sidebar-nav-item" href="/posts/">posts</a></li> + <li><a class="sidebar-nav-item" href="/3D-Designs/">3D designs</a></li> + <li><a class="sidebar-nav-item" href="/feed.rss">RSS Feed</a></li> + <li><a class="sidebar-nav-item" href="/colophon/">colophon</a></li> + </ul> + <p>© 2024. All rights reserved. + </div> +</div> + <div class="content container"> -<main> - + <div class="post"> <h1 id="workflow-for-lightning-fast-molecular-docking-part-one">Workflow for Lightning Fast Molecular Docking Part One</h1> <h2 id="my-setup">My Setup</h2> @@ -90,14 +108,15 @@ alias pbpaste='xclip -selection clipboard -o' <p>This is just the docking command for AutoDock Vina. In the next part I will tell how to use PyMOL and a plugin to directly generate the coordinates in Vina format <code>--center_x -9.7 --center_y 11.4 --center_z 68.9 --size_x 19.3 --size_y 29.9 --size_z 21.3</code> without needing to type them manually.</p> + </div> <blockquote>If you have scrolled this far, consider subscribing to my mailing list <a href="https://listmonk.navan.dev/subscription/form">here.</a> You can subscribe to either a specific type of post you are interested in, or subscribe to everything with the "Everything" list.</blockquote> <script data-isso="https://comments.navan.dev/" src="https://comments.navan.dev/js/embed.min.js"></script> <section id="isso-thread"> <noscript>Javascript needs to be activated to view comments.</noscript> </section> -</main> + </div> <script src="assets/manup.min.js"></script> <script src="/pwabuilder-sw-register.js"></script> </body> |