From 2f41128c0e74d5189f4e1bf86f5d3658acc1d22a Mon Sep 17 00:00:00 2001
From: Navan Chauhan <navanchauhan@gmail.com>
Date: Tue, 2 Jun 2020 23:25:49 +0530
Subject: Publish deploy 2020-06-02 23:25

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diff --git a/feed.rss b/feed.rss
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-<?xml version="1.0" encoding="UTF-8"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom" xmlns:content="http://purl.org/rss/1.0/modules/content"><channel><title>Navan Chauhan</title><description>Welcome to my personal fragment of the internet. Majority of the posts should be complete.</description><link>https://navanchauhan.github.io/</link><language>en</language><lastBuildDate>Tue, 2 Jun 2020 23:23:46 +0530</lastBuildDate><pubDate>Tue, 2 Jun 2020 23:23:46 +0530</pubDate><ttl>250</ttl><atom:link href="https://navanchauhan.github.io/feed.rss" rel="self" type="application/rss+xml"/><item><guid isPermaLink="true">https://navanchauhan.github.io/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS</guid><title>Compiling AutoDock Vina on iOS</title><description>Compiling AutoDock Vina on iOS</description><link>https://navanchauhan.github.io/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS</link><pubDate>Tue, 2 Jun 2020 23:23:00 +0530</pubDate><content:encoded><![CDATA[<h1>Compiling AutoDock Vina on iOS</h1><p>Why? Because I can.</p><h2>Installing makedepend</h2><p><code>makedepend</code> is a Unix tool used to generate dependencies of C source files. Most modern programes do not use this anymore, but then again AutoDock Vina's source code hasn't been changed since 2011. The first hurdle came when I saw that there was no makedepend command, neither was there any package on any development repository for iOS. So, I tracked down the original source code for <code>makedepend</code> (https://github.com/DerellLicht/makedepend). According to the repository this is actually the source code for the makedepend utility that came with some XWindows distribution back around Y2K. I am pretty sure there is a problem with my current compiler configuration because I had to manually edit the <code>Makefile</code> to provide the path to the iOS SDKs using the <code>-isysroot</code> flag.</p><h2>Editting the Makefile</h2><p>Original Makefile ( I used the provided mac Makefile base )</p><pre><code><div class="highlight"><span></span><span class="nv">BASE</span><span class="o">=</span>/usr/local
+<?xml version="1.0" encoding="UTF-8"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom" xmlns:content="http://purl.org/rss/1.0/modules/content"><channel><title>Navan Chauhan</title><description>Welcome to my personal fragment of the internet. Majority of the posts should be complete.</description><link>https://navanchauhan.github.io/</link><language>en</language><lastBuildDate>Tue, 2 Jun 2020 23:25:41 +0530</lastBuildDate><pubDate>Tue, 2 Jun 2020 23:25:41 +0530</pubDate><ttl>250</ttl><atom:link href="https://navanchauhan.github.io/feed.rss" rel="self" type="application/rss+xml"/><item><guid isPermaLink="true">https://navanchauhan.github.io/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS</guid><title>Compiling AutoDock Vina on iOS</title><description>Compiling AutoDock Vina on iOS</description><link>https://navanchauhan.github.io/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS</link><pubDate>Tue, 2 Jun 2020 23:23:00 +0530</pubDate><content:encoded><![CDATA[<h1>Compiling AutoDock Vina on iOS</h1><p>Why? Because I can.</p><h2>Installing makedepend</h2><p><code>makedepend</code> is a Unix tool used to generate dependencies of C source files. Most modern programes do not use this anymore, but then again AutoDock Vina's source code hasn't been changed since 2011. The first hurdle came when I saw that there was no makedepend command, neither was there any package on any development repository for iOS. So, I tracked down the original source code for <code>makedepend</code> (https://github.com/DerellLicht/makedepend). According to the repository this is actually the source code for the makedepend utility that came with some XWindows distribution back around Y2K. I am pretty sure there is a problem with my current compiler configuration because I had to manually edit the <code>Makefile</code> to provide the path to the iOS SDKs using the <code>-isysroot</code> flag.</p><h2>Editting the Makefile</h2><p>Original Makefile ( I used the provided mac Makefile base )</p><pre><code><div class="highlight"><span></span><span class="nv">BASE</span><span class="o">=</span>/usr/local
 <span class="nv">BOOST_VERSION</span><span class="o">=</span>1_41
 <span class="nv">BOOST_INCLUDE</span> <span class="o">=</span> <span class="k">$(</span>BASE<span class="k">)</span>/include
 <span class="nv">C_PLATFORM</span><span class="o">=</span>-arch i386 -arch ppc -isysroot /Developer/SDKs/MacOSX10.5.sdk -mmacosx-version-min<span class="o">=</span><span class="m">10</span>.4
@@ -33,7 +33,7 @@ include ../../makefile_common
 </div></code></pre><pre><code><div class="highlight"><span></span><span class="k">$(</span>pbpaste<span class="k">)</span>
 </div></code></pre><p>This is used in bash to evaluate the results of a command. In this scenario we are using it to get the contents of the clipboard.</p><p>The rest of the command is a normal Open Babel command to generate a 3D structure in PDBQT format and then save it as <code>test.pdbqt</code></p><pre><code><div class="highlight"><span></span><span class="o">&amp;&amp;</span>
 </div></code></pre><p>This tells the termianl to only run the next part if the previous command runs succesfuly without any errors.</p><pre><code><div class="highlight"><span></span>vina --receptor lu.pdbqt --center_x -9.7 --center_y <span class="m">11</span>.4 --center_z <span class="m">68</span>.9 --size_x <span class="m">19</span>.3 --size_y <span class="m">29</span>.9 --size_z <span class="m">21</span>.3  --ligand test.pdbqt
-</div></code></pre><p>This is just the docking command for AutoDock Vina. In the next part I will tell how to use PyMOL and a plugin to directly generate the coordinates in Vina format <code> --center_x -9.7 --center_y 11.4 --center_z 68.9 --size_x 19.3 --size_y 29.9 --size_z 21.3</code> without needing to type them manually.</p>]]></content:encoded></item><item><guid isPermaLink="true">https://navanchauhan.github.io/posts/2020-05-31-compiling-open-babel-on-ios</guid><title>Compiling Open Babel on iOS</title><description>Compiling Open Babel on iOS</description><link>https://navanchauhan.github.io/posts/2020-05-31-compiling-open-babel-on-ios</link><pubDate>Sun, 31 May 2020 11:30:00 +0530</pubDate><content:encoded><![CDATA[<h1>Compiling Open Babel on iOS</h1><p>Due to the fact that my summer vacations started today, I had the brilliant idea of trying to run open babel on my iPad. To give a little background, I had tried to compile AutoDock Vina using a cross-compiler but I had miserably failed.</p><p>I am running the Checkr1n jailbreak on my iPad and the Unc0ver jailbreak on my phone.</p><h2>But Why?</h2><p>Well, just because I can. This is literally the only reason I tried compiling it and also partially because in the long run I want to compile AutoDock Vina so I can do Molecular Docking on the go.</p><h2>Let's Go!</h2><p>How hard can it be to compile open babel right? It is just a simple software with clear and concise build instructions. I just need to use <code>cmake</code> to build and the <code>make</code> to install.</p><p>It is 11 AM in the morning. I install <code>clang, cmake and make</code> from the Sam Bingner's repository, fired up ssh, downloaded the source code and ran the build command.`clang</p><h3>Fail No. 1</h3><p>I couldn't even get cmake to run, I did a little digging arond StackOverflow and founf that I needed the iOS SDK, sure no problem. I waited for Xcode to update and transfered the <code>/Applications/Xcode.app/Contents/Developer/Platforms/iPhoneOS.platform/Developer/SDKs/iPhoneOS.sdk</code> to <code>/var/sdks/</code> on my iPad</p><p>Them I told cmake that this is the location for my SDK 😠. Succesful! Now I just needed to use make.</p><h3>Fail No. 2</h3><p>It was giving the error that thread-local-storage was not supported on this device.</p><pre><code><div class="highlight"><span></span><span class="o">[</span>  <span class="m">0</span>%<span class="o">]</span> Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o
+</div></code></pre><p>This is just the docking command for AutoDock Vina. In the next part I will tell how to use PyMOL and a plugin to directly generate the coordinates in Vina format <code> --center_x -9.7 --center_y 11.4 --center_z 68.9 --size_x 19.3 --size_y 29.9 --size_z 21.3</code> without needing to type them manually.</p>]]></content:encoded></item><item><guid isPermaLink="true">https://navanchauhan.github.io/posts/2020-05-31-compiling-open-babel-on-ios</guid><title>Compiling Open Babel on iOS</title><description>Compiling Open Babel on iOS</description><link>https://navanchauhan.github.io/posts/2020-05-31-compiling-open-babel-on-ios</link><pubDate>Sun, 31 May 2020 23:30:00 +0530</pubDate><content:encoded><![CDATA[<h1>Compiling Open Babel on iOS</h1><p>Due to the fact that my summer vacations started today, I had the brilliant idea of trying to run open babel on my iPad. To give a little background, I had tried to compile AutoDock Vina using a cross-compiler but I had miserably failed.</p><p>I am running the Checkr1n jailbreak on my iPad and the Unc0ver jailbreak on my phone.</p><h2>But Why?</h2><p>Well, just because I can. This is literally the only reason I tried compiling it and also partially because in the long run I want to compile AutoDock Vina so I can do Molecular Docking on the go.</p><h2>Let's Go!</h2><p>How hard can it be to compile open babel right? It is just a simple software with clear and concise build instructions. I just need to use <code>cmake</code> to build and the <code>make</code> to install.</p><p>It is 11 AM in the morning. I install <code>clang, cmake and make</code> from the Sam Bingner's repository, fired up ssh, downloaded the source code and ran the build command.`clang</p><h3>Fail No. 1</h3><p>I couldn't even get cmake to run, I did a little digging arond StackOverflow and founf that I needed the iOS SDK, sure no problem. I waited for Xcode to update and transfered the <code>/Applications/Xcode.app/Contents/Developer/Platforms/iPhoneOS.platform/Developer/SDKs/iPhoneOS.sdk</code> to <code>/var/sdks/</code> on my iPad</p><p>Them I told cmake that this is the location for my SDK 😠. Succesful! Now I just needed to use make.</p><h3>Fail No. 2</h3><p>It was giving the error that thread-local-storage was not supported on this device.</p><pre><code><div class="highlight"><span></span><span class="o">[</span>  <span class="m">0</span>%<span class="o">]</span> Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o
 <span class="o">[</span>  <span class="m">1</span>%<span class="o">]</span> Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o
 In file included from /var/root/obabel/ob-src/src/atom.cpp:28:
 In file included from /var/root/obabel/ob-src/include/openbabel/ring.h:29:
diff --git a/index.html b/index.html
index 23680e9..0081fde 100644
--- a/index.html
+++ b/index.html
@@ -1 +1 @@
-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/"/><meta name="twitter:url" content="https://navanchauhan.github.io/"/><meta name="og:url" content="https://navanchauhan.github.io/"/><title>Hi! | Navan Chauhan</title><meta name="twitter:title" content="Hi! | Navan Chauhan"/><meta name="og:title" content="Hi! | Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><link rel="manifest" href="manifest.json"/></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Hi!</h1><p class="description">Welcome to my personal fragment of the internet. Majority of the posts should be complete.</p><h2>Latest content</h2><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li><li><article><h1><a href="/posts/2020-04-13-Fixing-X11-Error-AmberTools-macOS">Fixing X11 Error on macOS Catalina for AmberTools 18/19</a></h1><ul class="tag-list"><li><a href="/tags/moleculardynamics">Molecular-Dynamics</a></li><li><a href="/tags/macos">macOS</a></li></ul><span>🕑 2 minute read. April 13, 2020</span><p>Fixing Could not find the X11 libraries; you may need to edit config.h, AmberTools macOS Catalina</p></article></li><li><article><h1><a href="/publications/2020-03-17-Possible-Drug-Candidates-COVID-19">Possible Drug Candidates for COVID-19</a></h1><ul class="tag-list"><li><a href="/tags/publication">publication</a></li><li><a href="/tags/preprint">pre-print</a></li></ul><span>🕑 1 minute read. March 17, 2020</span><p>COVID-19, has been officially labeled as a pandemic by the World Health Organisation. This paper presents cloperastine and vigabatrin as two possible drug candidates for combatting the disease along with the process by which they were discovered.</p></article></li><li><article><h1><a href="/publications/2020-03-14-generating-vaporwave">Is it possible to programmatically generate Vaporwave?</a></h1><ul class="tag-list"><li><a href="/tags/publication">publication</a></li><li><a href="/tags/preprint">pre-print</a></li></ul><span>🕑 1 minute read. March 14, 2020</span><p>This paper is about programmaticaly generating Vaporwave.</p></article></li><li><article><h1><a href="/posts/2020-03-08-Making-Vaporwave-Track">Making My First Vaporwave Track (Remix)</a></h1><ul class="tag-list"><li><a href="/tags/vaporwave">Vaporwave</a></li><li><a href="/tags/music">Music</a></li></ul><span>🕑 2 minute read. March 8, 2020</span><p>I made my first vaporwave remix</p></article></li><li><article><h1><a href="/posts/2020-03-03-Playing-With-Android-TV">Tinkering with an Android TV</a></h1><ul class="tag-list"><li><a href="/tags/androidtv">Android-TV</a></li><li><a href="/tags/android">Android</a></li></ul><span>🕑 1 minute read. March 3, 2020</span><p>Tinkering with an Android TV</p></article></li><li><article><h1><a href="/posts/2020-01-19-Connect-To-Bluetooth-Devices-Linux-Terminal">How to setup Bluetooth on a Raspberry Pi</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">tutorial</a></li><li><a href="/tags/raspberrypi">Raspberry-Pi</a></li><li><a href="/tags/linux">Linux</a></li></ul><span>🕑 1 minute read. January 19, 2020</span><p>Connecting to Bluetooth Devices using terminal, tested on Raspberry Pi Zero W</p></article></li><li><article><h1><a href="/posts/2020-01-16-Image-Classifier-Using-Turicreate">Creating a Custom Image Classifier using Turicreate to detect Smoke and Fire</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 6 minute read. January 16, 2020</span><p>Tutorial on creating a custom Image Classifier using Turicreate and a dataset from Kaggle</p></article></li><li><article><h1><a href="/posts/2020-01-15-Setting-up-Kaggle-to-use-with-Colab">Setting up Kaggle to use with Google Colab</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li><li><a href="/tags/kaggle">Kaggle</a></li></ul><span>🕑 1 minute read. January 15, 2020</span><p>Tutorial on setting up kaggle, to use with Google Colab</p></article></li><li><article><h1><a href="/posts/2020-01-14-Converting-between-PIL-NumPy">Converting between image and NumPy array</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. January 14, 2020</span><p>Short code snippet for converting between PIL image and NumPy arrays.</p></article></li><li><article><h1><a href="/posts/2019-12-22-Fake-News-Detector">Building a Fake News Detector with Turicreate</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/swiftui">SwiftUI</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 7 minute read. December 22, 2019</span><p>In this tutorial we will build a fake news detecting app from scratch, using Turicreate for the machine learning model and SwiftUI for building the app</p></article></li><li><article><h1><a href="/posts/2019-12-16-TensorFlow-Polynomial-Regression">Polynomial Regression Using TensorFlow</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 17 minute read. December 16, 2019</span><p>Polynomial regression using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-10-TensorFlow-Model-Prediction">Making Predictions using Image Classifier (TensorFlow)</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/codesnippet">Code-Snippet</a></li></ul><span>🕑 1 minute read. December 10, 2019</span><p>Making predictions for image classification models built using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-08-Image-Classifier-Tensorflow">Creating a Custom Image Classifier using Tensorflow 2.x and Keras for Detecting Malaria</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 4 minute read. December 8, 2019</span><p>Tutorial on creating an image classifier model using TensorFlow which detects malaria</p></article></li><li><article><h1><a href="/posts/2019-12-08-Splitting-Zips">Splitting ZIPs into Multiple Parts</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. December 8, 2019</span><p>Short code snippet for splitting zips.</p></article></li><li><article><h1><a href="/posts/2019-12-04-Google-Teachable-Machines">Image Classifier With Teachable Machines</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 2 minute read. December 4, 2019</span><p>Tutorial on creating a custom image classifier quickly with Google Teachanle Machines</p></article></li><li><article><h1><a href="/publications/2019-05-14-Detecting-Driver-Fatigue-Over-Speeding-and-Speeding-up-Post-Accident-Response">Detecting Driver Fatigue, Over-Speeding, and Speeding up Post-Accident Response</a></h1><ul class="tag-list"><li><a href="/tags/publication">publication</a></li></ul><span>🕑 1 minute read. May 14, 2019</span><p>This paper is about Detecting Driver Fatigue, Over-Speeding, and Speeding up Post-Accident Response.</p></article></li><li><article><h1><a href="/posts/2019-05-05-Custom-Snowboard-Anemone-Theme">Creating your own custom theme for Snowboard or Anemone</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/designing">Designing</a></li><li><a href="/tags/snowboard">Snowboard</a></li><li><a href="/tags/anemone">Anemone</a></li></ul><span>🕑 5 minute read. May 5, 2019</span><p>Tutorial on creating your own custom theme for Snowboard or Anemone</p></article></li><li><article><h1><a href="/posts/hello-world">Hello World</a></h1><ul class="tag-list"><li><a href="/tags/helloworld">hello-world</a></li></ul><span>🕑 1 minute read. April 16, 2019</span><p>My first post.</p></article></li><li><article><h1><a href="/posts/2010-01-24-experiments">Experiments</a></h1><ul class="tag-list"><li><a href="/tags/experiment">Experiment</a></li></ul><span>🕑 1 minute read. January 24, 2010</span><p>Just a markdown file for all experiments related to the website</p></article></li></ul></div><script src="assets/manup.min.js"></script><script src="/pwabuilder-sw-register.js"></script><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/"/><meta name="twitter:url" content="https://navanchauhan.github.io/"/><meta name="og:url" content="https://navanchauhan.github.io/"/><title>Hi! | Navan Chauhan</title><meta name="twitter:title" content="Hi! | Navan Chauhan"/><meta name="og:title" content="Hi! | Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><link rel="manifest" href="manifest.json"/></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Hi!</h1><p class="description">Welcome to my personal fragment of the internet. Majority of the posts should be complete.</p><h2>Latest content</h2><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li><li><article><h1><a href="/posts/2020-04-13-Fixing-X11-Error-AmberTools-macOS">Fixing X11 Error on macOS Catalina for AmberTools 18/19</a></h1><ul class="tag-list"><li><a href="/tags/moleculardynamics">Molecular-Dynamics</a></li><li><a href="/tags/macos">macOS</a></li></ul><span>🕑 2 minute read. April 13, 2020</span><p>Fixing Could not find the X11 libraries; you may need to edit config.h, AmberTools macOS Catalina</p></article></li><li><article><h1><a href="/publications/2020-03-17-Possible-Drug-Candidates-COVID-19">Possible Drug Candidates for COVID-19</a></h1><ul class="tag-list"><li><a href="/tags/publication">publication</a></li><li><a href="/tags/preprint">pre-print</a></li></ul><span>🕑 1 minute read. March 17, 2020</span><p>COVID-19, has been officially labeled as a pandemic by the World Health Organisation. This paper presents cloperastine and vigabatrin as two possible drug candidates for combatting the disease along with the process by which they were discovered.</p></article></li><li><article><h1><a href="/publications/2020-03-14-generating-vaporwave">Is it possible to programmatically generate Vaporwave?</a></h1><ul class="tag-list"><li><a href="/tags/publication">publication</a></li><li><a href="/tags/preprint">pre-print</a></li></ul><span>🕑 1 minute read. March 14, 2020</span><p>This paper is about programmaticaly generating Vaporwave.</p></article></li><li><article><h1><a href="/posts/2020-03-08-Making-Vaporwave-Track">Making My First Vaporwave Track (Remix)</a></h1><ul class="tag-list"><li><a href="/tags/vaporwave">Vaporwave</a></li><li><a href="/tags/music">Music</a></li></ul><span>🕑 2 minute read. March 8, 2020</span><p>I made my first vaporwave remix</p></article></li><li><article><h1><a href="/posts/2020-03-03-Playing-With-Android-TV">Tinkering with an Android TV</a></h1><ul class="tag-list"><li><a href="/tags/androidtv">Android-TV</a></li><li><a href="/tags/android">Android</a></li></ul><span>🕑 1 minute read. March 3, 2020</span><p>Tinkering with an Android TV</p></article></li><li><article><h1><a href="/posts/2020-01-19-Connect-To-Bluetooth-Devices-Linux-Terminal">How to setup Bluetooth on a Raspberry Pi</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">tutorial</a></li><li><a href="/tags/raspberrypi">Raspberry-Pi</a></li><li><a href="/tags/linux">Linux</a></li></ul><span>🕑 1 minute read. January 19, 2020</span><p>Connecting to Bluetooth Devices using terminal, tested on Raspberry Pi Zero W</p></article></li><li><article><h1><a href="/posts/2020-01-16-Image-Classifier-Using-Turicreate">Creating a Custom Image Classifier using Turicreate to detect Smoke and Fire</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 6 minute read. January 16, 2020</span><p>Tutorial on creating a custom Image Classifier using Turicreate and a dataset from Kaggle</p></article></li><li><article><h1><a href="/posts/2020-01-15-Setting-up-Kaggle-to-use-with-Colab">Setting up Kaggle to use with Google Colab</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li><li><a href="/tags/kaggle">Kaggle</a></li></ul><span>🕑 1 minute read. January 15, 2020</span><p>Tutorial on setting up kaggle, to use with Google Colab</p></article></li><li><article><h1><a href="/posts/2020-01-14-Converting-between-PIL-NumPy">Converting between image and NumPy array</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. January 14, 2020</span><p>Short code snippet for converting between PIL image and NumPy arrays.</p></article></li><li><article><h1><a href="/posts/2019-12-22-Fake-News-Detector">Building a Fake News Detector with Turicreate</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/swiftui">SwiftUI</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 7 minute read. December 22, 2019</span><p>In this tutorial we will build a fake news detecting app from scratch, using Turicreate for the machine learning model and SwiftUI for building the app</p></article></li><li><article><h1><a href="/posts/2019-12-16-TensorFlow-Polynomial-Regression">Polynomial Regression Using TensorFlow</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 17 minute read. 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December 8, 2019</span><p>Tutorial on creating an image classifier model using TensorFlow which detects malaria</p></article></li><li><article><h1><a href="/posts/2019-12-08-Splitting-Zips">Splitting ZIPs into Multiple Parts</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. December 8, 2019</span><p>Short code snippet for splitting zips.</p></article></li><li><article><h1><a href="/posts/2019-12-04-Google-Teachable-Machines">Image Classifier With Teachable Machines</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 2 minute read. December 4, 2019</span><p>Tutorial on creating a custom image classifier quickly with Google Teachanle Machines</p></article></li><li><article><h1><a href="/publications/2019-05-14-Detecting-Driver-Fatigue-Over-Speeding-and-Speeding-up-Post-Accident-Response">Detecting Driver Fatigue, Over-Speeding, and Speeding up Post-Accident Response</a></h1><ul class="tag-list"><li><a href="/tags/publication">publication</a></li></ul><span>🕑 1 minute read. May 14, 2019</span><p>This paper is about Detecting Driver Fatigue, Over-Speeding, and Speeding up Post-Accident Response.</p></article></li><li><article><h1><a href="/posts/2019-05-05-Custom-Snowboard-Anemone-Theme">Creating your own custom theme for Snowboard or Anemone</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/designing">Designing</a></li><li><a href="/tags/snowboard">Snowboard</a></li><li><a href="/tags/anemone">Anemone</a></li></ul><span>🕑 5 minute read. May 5, 2019</span><p>Tutorial on creating your own custom theme for Snowboard or Anemone</p></article></li><li><article><h1><a href="/posts/hello-world">Hello World</a></h1><ul class="tag-list"><li><a href="/tags/helloworld">hello-world</a></li></ul><span>🕑 1 minute read. April 16, 2019</span><p>My first post.</p></article></li><li><article><h1><a href="/posts/2010-01-24-experiments">Experiments</a></h1><ul class="tag-list"><li><a href="/tags/experiment">Experiment</a></li></ul><span>🕑 1 minute read. January 24, 2010</span><p>Just a markdown file for all experiments related to the website</p></article></li></ul></div><script src="assets/manup.min.js"></script><script src="/pwabuilder-sw-register.js"></script><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL/index.html b/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL/index.html
index f7ac7fa..0da2ef5 100644
--- a/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL/index.html
+++ b/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL/index.html
@@ -1,8 +1,8 @@
-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL"/><meta name="twitter:url" content="https://navanchauhan.github.io/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL"/><meta name="og:url" content="https://navanchauhan.github.io/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL"/><title>Workflow for Lightning Fast Molecular Docking Part One | Navan Chauhan</title><meta name="twitter:title" content="Workflow for Lightning Fast Molecular Docking Part One | Navan Chauhan"/><meta name="og:title" content="Workflow for Lightning Fast Molecular Docking Part One | Navan Chauhan"/><meta name="description" content="This is my workflow for lightning fast molecular docking."/><meta name="twitter:description" content="This is my workflow for lightning fast molecular docking."/><meta name="og:description" content="This is my workflow for lightning fast molecular docking."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body class="item-page"><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a class="selected" href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><article><div class="content"><span class="reading-time">2 minute read</span><span class="reading-time">Created on June 1, 2020</span><h1>Workflow for Lightning Fast Molecular Docking Part One</h1><h2>My Setup</h2><ul><li>macOS Catalina ( RIP 32bit app)</li><li>PyMOL</li><li>AutoDock Vina</li><li>Open Babel</li></ul><h2>One Command Docking</h2><pre><code><div class="highlight"><span></span>obabel -:<span class="s2">&quot;</span><span class="k">$(</span>pbpaste<span class="k">)</span><span class="s2">&quot;</span> --gen3d -opdbqt -Otest.pdbqt <span class="o">&amp;&amp;</span> vina --receptor lu.pdbqt --center_x -9.7 --center_y <span class="m">11</span>.4 --center_z <span class="m">68</span>.9 --size_x <span class="m">19</span>.3 --size_y <span class="m">29</span>.9 --size_z <span class="m">21</span>.3  --ligand test.pdbqt
+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL"/><meta name="twitter:url" content="https://navanchauhan.github.io/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL"/><meta name="og:url" content="https://navanchauhan.github.io/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL"/><title>Workflow for Lightning Fast Molecular Docking Part One | Navan Chauhan</title><meta name="twitter:title" content="Workflow for Lightning Fast Molecular Docking Part One | Navan Chauhan"/><meta name="og:title" content="Workflow for Lightning Fast Molecular Docking Part One | Navan Chauhan"/><meta name="description" content="This is my workflow for lightning fast molecular docking."/><meta name="twitter:description" content="This is my workflow for lightning fast molecular docking."/><meta name="og:description" content="This is my workflow for lightning fast molecular docking."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body class="item-page"><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a class="selected" href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><article><div class="content"><span class="reading-time">2 minute read</span><span class="reading-time">Created on June 1, 2020</span><span class="reading-time">Last modified on June 2, 2020</span><h1>Workflow for Lightning Fast Molecular Docking Part One</h1><h2>My Setup</h2><ul><li>macOS Catalina ( RIP 32bit app)</li><li>PyMOL</li><li>AutoDock Vina</li><li>Open Babel</li></ul><h2>One Command Docking</h2><pre><code><div class="highlight"><span></span>obabel -:<span class="s2">&quot;</span><span class="k">$(</span>pbpaste<span class="k">)</span><span class="s2">&quot;</span> --gen3d -opdbqt -Otest.pdbqt <span class="o">&amp;&amp;</span> vina --receptor lu.pdbqt --center_x -9.7 --center_y <span class="m">11</span>.4 --center_z <span class="m">68</span>.9 --size_x <span class="m">19</span>.3 --size_y <span class="m">29</span>.9 --size_z <span class="m">21</span>.3  --ligand test.pdbqt
 </div></code></pre><p>To run this command you simple copy the SMILES structure of the ligand you want an it automatically takes it from your clipboard, generates the 3D structure in the AutoDock PDBQT format using Open Babel and then docks it with your receptor using AutoDock Vina, all with just one command.</p><p>Let me break down the commands</p><pre><code><div class="highlight"><span></span>obabel -:<span class="s2">&quot;</span><span class="k">$(</span>pbpaste<span class="k">)</span><span class="s2">&quot;</span> --gen3d -opdbqt -Otest.pdbqt
 </div></code></pre><p><code>pbpaste</code> and <code>pbcopy</code> are macOS commands for pasting and copying from and to the clipboard. Linux users may install the <code>xclip</code> and <code>xsel</code> packages from their respective package managers and then insert these aliases into their bash_profile, zshrc e.t.c</p><pre><code><div class="highlight"><span></span><span class="nb">alias</span> <span class="nv">pbcopy</span><span class="o">=</span><span class="s1">&#39;xclip -selection clipboard&#39;</span>
 <span class="nb">alias</span> <span class="nv">pbpaste</span><span class="o">=</span><span class="s1">&#39;xclip -selection clipboard -o&#39;</span>
 </div></code></pre><pre><code><div class="highlight"><span></span><span class="k">$(</span>pbpaste<span class="k">)</span>
 </div></code></pre><p>This is used in bash to evaluate the results of a command. In this scenario we are using it to get the contents of the clipboard.</p><p>The rest of the command is a normal Open Babel command to generate a 3D structure in PDBQT format and then save it as <code>test.pdbqt</code></p><pre><code><div class="highlight"><span></span><span class="o">&amp;&amp;</span>
 </div></code></pre><p>This tells the termianl to only run the next part if the previous command runs succesfuly without any errors.</p><pre><code><div class="highlight"><span></span>vina --receptor lu.pdbqt --center_x -9.7 --center_y <span class="m">11</span>.4 --center_z <span class="m">68</span>.9 --size_x <span class="m">19</span>.3 --size_y <span class="m">29</span>.9 --size_z <span class="m">21</span>.3  --ligand test.pdbqt
-</div></code></pre><p>This is just the docking command for AutoDock Vina. In the next part I will tell how to use PyMOL and a plugin to directly generate the coordinates in Vina format <code> --center_x -9.7 --center_y 11.4 --center_z 68.9 --size_x 19.3 --size_y 29.9 --size_z 21.3</code> without needing to type them manually.</p></div><span>Tagged with: </span><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><div id="disqus_thread"></div><script src="/assets/disqus.js"></script><noscript>Please enable JavaScript to view the comments</noscript></article></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+</div></code></pre><p>This is just the docking command for AutoDock Vina. In the next part I will tell how to use PyMOL and a plugin to directly generate the coordinates in Vina format <code> --center_x -9.7 --center_y 11.4 --center_z 68.9 --size_x 19.3 --size_y 29.9 --size_z 21.3</code> without needing to type them manually.</p></div><span>Tagged with: </span><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><div id="disqus_thread"></div><script src="/assets/disqus.js"></script><noscript>Please enable JavaScript to view the comments</noscript></article></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS/index.html b/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS/index.html
index 2265b38..e160e76 100644
--- a/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS/index.html
+++ b/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS/index.html
@@ -26,4 +26,4 @@ include ../../makefile_common
                 std::cerr &lt;&lt; <span class="s2">&quot;\n\nParse error on line &quot;</span> <span class="s">&lt;&lt; e.line</span> &lt;&lt; <span class="s2">&quot; in file \&quot;&quot;</span> <span class="s">&lt;&lt; e.file</span>.native_file_string<span class="o">()</span> &lt;&lt; <span class="s2">&quot;\&quot;: &quot;</span> <span class="s">&lt;&lt; e.re</span>ason <span class="s">&lt;&lt; &#39;\n&#39;;</span>
 <span class="s">                                                                                      ~~~~~~ ^</span>
 <span class="s">2 errors gen</span>erated.
-</div></code></pre><p>Turns out <code>native_file_string</code> was deprecated in Boost 1.57 and replaced with just <code>string</code></p><h3>Error 3 - Library Not Found</h3><p>This one still boggles me because there was no reason for it to not work, as a workaround I downloaded the DEB, extracted it and used that path for compiling.</p><h3>Error 4 - No Member Named 'native<em>file</em>string' Again.</h3><p>But, this time in another file and I quickle fixed it</p><h2>Moment of Truth</h2><p>Obviously it was working on my iPad, but would it work on another device? I transfered the compiled binary and</p><img src="/assets/posts/autodock-vina/s1.png" alt=""AutoDock Vina running on my iPhone""/><p>The package is available on my repository and only depends on boost. ( Both, Vina and Vina-Split are part of the package)</p></div><span>Tagged with: </span><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><div id="disqus_thread"></div><script src="/assets/disqus.js"></script><noscript>Please enable JavaScript to view the comments</noscript></article></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+</div></code></pre><p>Turns out <code>native_file_string</code> was deprecated in Boost 1.57 and replaced with just <code>string</code></p><h3>Error 3 - Library Not Found</h3><p>This one still boggles me because there was no reason for it to not work, as a workaround I downloaded the DEB, extracted it and used that path for compiling.</p><h3>Error 4 - No Member Named 'native<em>file</em>string' Again.</h3><p>But, this time in another file and I quickle fixed it</p><h2>Moment of Truth</h2><p>Obviously it was working on my iPad, but would it work on another device? I transfered the compiled binary and</p><img src="/assets/posts/autodock-vina/s1.png" alt=""AutoDock Vina running on my iPhone""/><p>The package is available on my repository and only depends on boost. ( Both, Vina and Vina-Split are part of the package)</p></div><span>Tagged with: </span><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li></ul><div id="disqus_thread"></div><script src="/assets/disqus.js"></script><noscript>Please enable JavaScript to view the comments</noscript></article></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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@@ -1 +1 @@
-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/posts"/><meta name="twitter:url" content="https://navanchauhan.github.io/posts"/><meta name="og:url" content="https://navanchauhan.github.io/posts"/><title>Posts | Navan Chauhan</title><meta name="twitter:title" content="Posts | Navan Chauhan"/><meta name="og:title" content="Posts | Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a class="selected" href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Posts</h1><p>Tips, tricks and tutorials which I think might be useful.</p><ul class="item-list"><li><article><h1><a href="/posts/2010-01-24-experiments">Experiments</a></h1><ul class="tag-list"><li><a href="/tags/experiment">Experiment</a></li></ul><span>🕑 1 minute read. January 24, 2010</span><p>Just a markdown file for all experiments related to the website</p></article></li><li><article><h1><a href="/posts/2019-05-05-Custom-Snowboard-Anemone-Theme">Creating your own custom theme for Snowboard or Anemone</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/designing">Designing</a></li><li><a href="/tags/snowboard">Snowboard</a></li><li><a href="/tags/anemone">Anemone</a></li></ul><span>🕑 5 minute read. May 5, 2019</span><p>Tutorial on creating your own custom theme for Snowboard or Anemone</p></article></li><li><article><h1><a href="/posts/2019-12-04-Google-Teachable-Machines">Image Classifier With Teachable Machines</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 2 minute read. December 4, 2019</span><p>Tutorial on creating a custom image classifier quickly with Google Teachanle Machines</p></article></li><li><article><h1><a href="/posts/2019-12-08-Image-Classifier-Tensorflow">Creating a Custom Image Classifier using Tensorflow 2.x and Keras for Detecting Malaria</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 4 minute read. December 8, 2019</span><p>Tutorial on creating an image classifier model using TensorFlow which detects malaria</p></article></li><li><article><h1><a href="/posts/2019-12-08-Splitting-Zips">Splitting ZIPs into Multiple Parts</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. December 8, 2019</span><p>Short code snippet for splitting zips.</p></article></li><li><article><h1><a href="/posts/2019-12-10-TensorFlow-Model-Prediction">Making Predictions using Image Classifier (TensorFlow)</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/codesnippet">Code-Snippet</a></li></ul><span>🕑 1 minute read. December 10, 2019</span><p>Making predictions for image classification models built using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-16-TensorFlow-Polynomial-Regression">Polynomial Regression Using TensorFlow</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 17 minute read. December 16, 2019</span><p>Polynomial regression using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-22-Fake-News-Detector">Building a Fake News Detector with Turicreate</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/swiftui">SwiftUI</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 7 minute read. December 22, 2019</span><p>In this tutorial we will build a fake news detecting app from scratch, using Turicreate for the machine learning model and SwiftUI for building the app</p></article></li><li><article><h1><a href="/posts/2020-01-14-Converting-between-PIL-NumPy">Converting between image and NumPy array</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. January 14, 2020</span><p>Short code snippet for converting between PIL image and NumPy arrays.</p></article></li><li><article><h1><a href="/posts/2020-01-15-Setting-up-Kaggle-to-use-with-Colab">Setting up Kaggle to use with Google Colab</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li><li><a href="/tags/kaggle">Kaggle</a></li></ul><span>🕑 1 minute read. January 15, 2020</span><p>Tutorial on setting up kaggle, to use with Google Colab</p></article></li><li><article><h1><a href="/posts/2020-01-16-Image-Classifier-Using-Turicreate">Creating a Custom Image Classifier using Turicreate to detect Smoke and Fire</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 6 minute read. January 16, 2020</span><p>Tutorial on creating a custom Image Classifier using Turicreate and a dataset from Kaggle</p></article></li><li><article><h1><a href="/posts/2020-01-19-Connect-To-Bluetooth-Devices-Linux-Terminal">How to setup Bluetooth on a Raspberry Pi</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">tutorial</a></li><li><a href="/tags/raspberrypi">Raspberry-Pi</a></li><li><a href="/tags/linux">Linux</a></li></ul><span>🕑 1 minute read. January 19, 2020</span><p>Connecting to Bluetooth Devices using terminal, tested on Raspberry Pi Zero W</p></article></li><li><article><h1><a href="/posts/2020-03-03-Playing-With-Android-TV">Tinkering with an Android TV</a></h1><ul class="tag-list"><li><a href="/tags/androidtv">Android-TV</a></li><li><a href="/tags/android">Android</a></li></ul><span>🕑 1 minute read. March 3, 2020</span><p>Tinkering with an Android TV</p></article></li><li><article><h1><a href="/posts/2020-03-08-Making-Vaporwave-Track">Making My First Vaporwave Track (Remix)</a></h1><ul class="tag-list"><li><a href="/tags/vaporwave">Vaporwave</a></li><li><a href="/tags/music">Music</a></li></ul><span>🕑 2 minute read. March 8, 2020</span><p>I made my first vaporwave remix</p></article></li><li><article><h1><a href="/posts/2020-04-13-Fixing-X11-Error-AmberTools-macOS">Fixing X11 Error on macOS Catalina for AmberTools 18/19</a></h1><ul class="tag-list"><li><a href="/tags/moleculardynamics">Molecular-Dynamics</a></li><li><a href="/tags/macos">macOS</a></li></ul><span>🕑 2 minute read. April 13, 2020</span><p>Fixing Could not find the X11 libraries; you may need to edit config.h, AmberTools macOS Catalina</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/hello-world">Hello World</a></h1><ul class="tag-list"><li><a href="/tags/helloworld">hello-world</a></li></ul><span>🕑 1 minute read. April 16, 2019</span><p>My first post.</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/posts"/><meta name="twitter:url" content="https://navanchauhan.github.io/posts"/><meta name="og:url" content="https://navanchauhan.github.io/posts"/><title>Posts | Navan Chauhan</title><meta name="twitter:title" content="Posts | Navan Chauhan"/><meta name="og:title" content="Posts | Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a class="selected" href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Posts</h1><p>Tips, tricks and tutorials which I think might be useful.</p><ul class="item-list"><li><article><h1><a href="/posts/2010-01-24-experiments">Experiments</a></h1><ul class="tag-list"><li><a href="/tags/experiment">Experiment</a></li></ul><span>🕑 1 minute read. January 24, 2010</span><p>Just a markdown file for all experiments related to the website</p></article></li><li><article><h1><a href="/posts/2019-05-05-Custom-Snowboard-Anemone-Theme">Creating your own custom theme for Snowboard or Anemone</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/designing">Designing</a></li><li><a href="/tags/snowboard">Snowboard</a></li><li><a href="/tags/anemone">Anemone</a></li></ul><span>🕑 5 minute read. May 5, 2019</span><p>Tutorial on creating your own custom theme for Snowboard or Anemone</p></article></li><li><article><h1><a href="/posts/2019-12-04-Google-Teachable-Machines">Image Classifier With Teachable Machines</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 2 minute read. December 4, 2019</span><p>Tutorial on creating a custom image classifier quickly with Google Teachanle Machines</p></article></li><li><article><h1><a href="/posts/2019-12-08-Image-Classifier-Tensorflow">Creating a Custom Image Classifier using Tensorflow 2.x and Keras for Detecting Malaria</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 4 minute read. December 8, 2019</span><p>Tutorial on creating an image classifier model using TensorFlow which detects malaria</p></article></li><li><article><h1><a href="/posts/2019-12-08-Splitting-Zips">Splitting ZIPs into Multiple Parts</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. December 8, 2019</span><p>Short code snippet for splitting zips.</p></article></li><li><article><h1><a href="/posts/2019-12-10-TensorFlow-Model-Prediction">Making Predictions using Image Classifier (TensorFlow)</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/codesnippet">Code-Snippet</a></li></ul><span>🕑 1 minute read. December 10, 2019</span><p>Making predictions for image classification models built using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-16-TensorFlow-Polynomial-Regression">Polynomial Regression Using TensorFlow</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 17 minute read. December 16, 2019</span><p>Polynomial regression using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-22-Fake-News-Detector">Building a Fake News Detector with Turicreate</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/swiftui">SwiftUI</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 7 minute read. December 22, 2019</span><p>In this tutorial we will build a fake news detecting app from scratch, using Turicreate for the machine learning model and SwiftUI for building the app</p></article></li><li><article><h1><a href="/posts/2020-01-14-Converting-between-PIL-NumPy">Converting between image and NumPy array</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. January 14, 2020</span><p>Short code snippet for converting between PIL image and NumPy arrays.</p></article></li><li><article><h1><a href="/posts/2020-01-15-Setting-up-Kaggle-to-use-with-Colab">Setting up Kaggle to use with Google Colab</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li><li><a href="/tags/kaggle">Kaggle</a></li></ul><span>🕑 1 minute read. January 15, 2020</span><p>Tutorial on setting up kaggle, to use with Google Colab</p></article></li><li><article><h1><a href="/posts/2020-01-16-Image-Classifier-Using-Turicreate">Creating a Custom Image Classifier using Turicreate to detect Smoke and Fire</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 6 minute read. January 16, 2020</span><p>Tutorial on creating a custom Image Classifier using Turicreate and a dataset from Kaggle</p></article></li><li><article><h1><a href="/posts/2020-01-19-Connect-To-Bluetooth-Devices-Linux-Terminal">How to setup Bluetooth on a Raspberry Pi</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">tutorial</a></li><li><a href="/tags/raspberrypi">Raspberry-Pi</a></li><li><a href="/tags/linux">Linux</a></li></ul><span>🕑 1 minute read. January 19, 2020</span><p>Connecting to Bluetooth Devices using terminal, tested on Raspberry Pi Zero W</p></article></li><li><article><h1><a href="/posts/2020-03-03-Playing-With-Android-TV">Tinkering with an Android TV</a></h1><ul class="tag-list"><li><a href="/tags/androidtv">Android-TV</a></li><li><a href="/tags/android">Android</a></li></ul><span>🕑 1 minute read. March 3, 2020</span><p>Tinkering with an Android TV</p></article></li><li><article><h1><a href="/posts/2020-03-08-Making-Vaporwave-Track">Making My First Vaporwave Track (Remix)</a></h1><ul class="tag-list"><li><a href="/tags/vaporwave">Vaporwave</a></li><li><a href="/tags/music">Music</a></li></ul><span>🕑 2 minute read. March 8, 2020</span><p>I made my first vaporwave remix</p></article></li><li><article><h1><a href="/posts/2020-04-13-Fixing-X11-Error-AmberTools-macOS">Fixing X11 Error on macOS Catalina for AmberTools 18/19</a></h1><ul class="tag-list"><li><a href="/tags/moleculardynamics">Molecular-Dynamics</a></li><li><a href="/tags/macos">macOS</a></li></ul><span>🕑 2 minute read. April 13, 2020</span><p>Fixing Could not find the X11 libraries; you may need to edit config.h, AmberTools macOS Catalina</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/hello-world">Hello World</a></h1><ul class="tag-list"><li><a href="/tags/helloworld">hello-world</a></li></ul><span>🕑 1 minute read. April 16, 2019</span><p>My first post.</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/tags/autodock-vina/index.html b/tags/autodock-vina/index.html
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-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/autodock-vina"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/autodock-vina"/><meta name="og:url" content="https://navanchauhan.github.io/tags/autodock-vina"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">AutoDock Vina</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/autodock-vina"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/autodock-vina"/><meta name="og:url" content="https://navanchauhan.github.io/tags/autodock-vina"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">AutoDock Vina</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/tags/cheminformatics/index.html b/tags/cheminformatics/index.html
index 0388cb5..638e81f 100644
--- a/tags/cheminformatics/index.html
+++ b/tags/cheminformatics/index.html
@@ -1 +1 @@
-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/cheminformatics"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/cheminformatics"/><meta name="og:url" content="https://navanchauhan.github.io/tags/cheminformatics"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Cheminformatics</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/cheminformatics"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/cheminformatics"/><meta name="og:url" content="https://navanchauhan.github.io/tags/cheminformatics"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Cheminformatics</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/tags/codesnippet/index.html b/tags/codesnippet/index.html
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-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/codesnippet"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/codesnippet"/><meta name="og:url" content="https://navanchauhan.github.io/tags/codesnippet"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Code-Snippet</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-01-19-Connect-To-Bluetooth-Devices-Linux-Terminal">How to setup Bluetooth on a Raspberry Pi</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">tutorial</a></li><li><a href="/tags/raspberrypi">Raspberry-Pi</a></li><li><a href="/tags/linux">Linux</a></li></ul><span>🕑 1 minute read. January 19, 2020</span><p>Connecting to Bluetooth Devices using terminal, tested on Raspberry Pi Zero W</p></article></li><li><article><h1><a href="/posts/2020-01-14-Converting-between-PIL-NumPy">Converting between image and NumPy array</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. January 14, 2020</span><p>Short code snippet for converting between PIL image and NumPy arrays.</p></article></li><li><article><h1><a href="/posts/2019-12-10-TensorFlow-Model-Prediction">Making Predictions using Image Classifier (TensorFlow)</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/codesnippet">Code-Snippet</a></li></ul><span>🕑 1 minute read. December 10, 2019</span><p>Making predictions for image classification models built using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-08-Splitting-Zips">Splitting ZIPs into Multiple Parts</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. December 8, 2019</span><p>Short code snippet for splitting zips.</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/codesnippet"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/codesnippet"/><meta name="og:url" content="https://navanchauhan.github.io/tags/codesnippet"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Code-Snippet</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-01-19-Connect-To-Bluetooth-Devices-Linux-Terminal">How to setup Bluetooth on a Raspberry Pi</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">tutorial</a></li><li><a href="/tags/raspberrypi">Raspberry-Pi</a></li><li><a href="/tags/linux">Linux</a></li></ul><span>🕑 1 minute read. January 19, 2020</span><p>Connecting to Bluetooth Devices using terminal, tested on Raspberry Pi Zero W</p></article></li><li><article><h1><a href="/posts/2020-01-14-Converting-between-PIL-NumPy">Converting between image and NumPy array</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. January 14, 2020</span><p>Short code snippet for converting between PIL image and NumPy arrays.</p></article></li><li><article><h1><a href="/posts/2019-12-10-TensorFlow-Model-Prediction">Making Predictions using Image Classifier (TensorFlow)</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/codesnippet">Code-Snippet</a></li></ul><span>🕑 1 minute read. December 10, 2019</span><p>Making predictions for image classification models built using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-08-Splitting-Zips">Splitting ZIPs into Multiple Parts</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. December 8, 2019</span><p>Short code snippet for splitting zips.</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/tags/ios/index.html b/tags/ios/index.html
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-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/ios"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/ios"/><meta name="og:url" content="https://navanchauhan.github.io/tags/ios"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">iOS</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/ios"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/ios"/><meta name="og:url" content="https://navanchauhan.github.io/tags/ios"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">iOS</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/jailbreak"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/jailbreak"/><meta name="og:url" content="https://navanchauhan.github.io/tags/jailbreak"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Jailbreak</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li><li><article><h1><a href="/posts/2019-05-05-Custom-Snowboard-Anemone-Theme">Creating your own custom theme for Snowboard or Anemone</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/designing">Designing</a></li><li><a href="/tags/snowboard">Snowboard</a></li><li><a href="/tags/anemone">Anemone</a></li></ul><span>🕑 5 minute read. May 5, 2019</span><p>Tutorial on creating your own custom theme for Snowboard or Anemone</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/jailbreak"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/jailbreak"/><meta name="og:url" content="https://navanchauhan.github.io/tags/jailbreak"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Jailbreak</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li><li><article><h1><a href="/posts/2019-05-05-Custom-Snowboard-Anemone-Theme">Creating your own custom theme for Snowboard or Anemone</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/designing">Designing</a></li><li><a href="/tags/snowboard">Snowboard</a></li><li><a href="/tags/anemone">Anemone</a></li></ul><span>🕑 5 minute read. May 5, 2019</span><p>Tutorial on creating your own custom theme for Snowboard or Anemone</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/tags/moleculardocking/index.html b/tags/moleculardocking/index.html
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-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/moleculardocking"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/moleculardocking"/><meta name="og:url" content="https://navanchauhan.github.io/tags/moleculardocking"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Molecular-Docking</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/moleculardocking"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/moleculardocking"/><meta name="og:url" content="https://navanchauhan.github.io/tags/moleculardocking"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Molecular-Docking</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS">Compiling AutoDock Vina on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li></ul><span>🕑 3 minute read. June 2, 2020</span><p>Compiling AutoDock Vina on iOS</p></article></li><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/tags/openbabel/index.html b/tags/openbabel/index.html
index e625088..4e7b686 100644
--- a/tags/openbabel/index.html
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@@ -1 +1 @@
-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/openbabel"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/openbabel"/><meta name="og:url" content="https://navanchauhan.github.io/tags/openbabel"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Open-Babel</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/openbabel"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/openbabel"/><meta name="og:url" content="https://navanchauhan.github.io/tags/openbabel"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Open-Babel</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-06-01-Speeding-Up-Molecular-Docking-Workflow-AutoDock-Vina-and-PyMOL">Workflow for Lightning Fast Molecular Docking Part One</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/moleculardocking">Molecular-Docking</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li><li><a href="/tags/autodock-vina">AutoDock Vina</a></li></ul><span>🕑 2 minute read. June 1, 2020</span><p>This is my workflow for lightning fast molecular docking.</p></article></li><li><article><h1><a href="/posts/2020-05-31-compiling-open-babel-on-ios">Compiling Open Babel on iOS</a></h1><ul class="tag-list"><li><a href="/tags/ios">iOS</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/cheminformatics">Cheminformatics</a></li><li><a href="/tags/openbabel">Open-Babel</a></li></ul><span>🕑 5 minute read. May 31, 2020</span><p>Compiling Open Babel on iOS</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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diff --git a/tags/tutorial/index.html b/tags/tutorial/index.html
index d561bfd..9bec523 100644
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+++ b/tags/tutorial/index.html
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-<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/tutorial"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/tutorial"/><meta name="og:url" content="https://navanchauhan.github.io/tags/tutorial"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">tutorial</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-01-19-Connect-To-Bluetooth-Devices-Linux-Terminal">How to setup Bluetooth on a Raspberry Pi</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">tutorial</a></li><li><a href="/tags/raspberrypi">Raspberry-Pi</a></li><li><a href="/tags/linux">Linux</a></li></ul><span>🕑 1 minute read. January 19, 2020</span><p>Connecting to Bluetooth Devices using terminal, tested on Raspberry Pi Zero W</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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+<!DOCTYPE html><html lang="en"><head><meta charset="UTF-8"/><meta name="og:site_name" content="Navan Chauhan"/><link rel="canonical" href="https://navanchauhan.github.io/tags/tutorial"/><meta name="twitter:url" content="https://navanchauhan.github.io/tags/tutorial"/><meta name="og:url" content="https://navanchauhan.github.io/tags/tutorial"/><title>Navan Chauhan</title><meta name="twitter:title" content="Navan Chauhan"/><meta name="og:title" content="Navan Chauhan"/><meta name="description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="og:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete."/><meta name="twitter:card" content="summary"/><link rel="stylesheet" href="/styles.css" type="text/css"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><link rel="shortcut icon" href="/images/favicon.png" type="image/png"/><link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan"/><meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png"/><meta name="og:image" content="https://navanchauhan.github.io/images/logo.png"/></head><head><script src="https://www.googletagmanager.com/gtag/js?id=UA-108635191-1v"></script><script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments);}gtag('js', new Date());gtag('config', 'UA-108635191-1');</script></head><body><header><div class="wrapper"><a class="site-name" href="/">Navan Chauhan</a><nav><ul><li><a href="/about">About Me</a></li><li><a href="/posts">Posts</a></li><li><a href="/publications">Publications</a></li><li><a href="/assets/résumé.pdf">Résumé</a></li><li><a href="https://navanchauhan.github.io/repo">Repo</a></li></ul></nav></div></header><div class="wrapper"><h1>Tagged with <span class="tag">Tutorial</span></h1><a class="browse-all" href="/tags">Browse all tags</a><ul class="item-list"><li><article><h1><a href="/posts/2020-01-16-Image-Classifier-Using-Turicreate">Creating a Custom Image Classifier using Turicreate to detect Smoke and Fire</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 6 minute read. January 16, 2020</span><p>Tutorial on creating a custom Image Classifier using Turicreate and a dataset from Kaggle</p></article></li><li><article><h1><a href="/posts/2020-01-15-Setting-up-Kaggle-to-use-with-Colab">Setting up Kaggle to use with Google Colab</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/turicreate">Turicreate</a></li><li><a href="/tags/kaggle">Kaggle</a></li></ul><span>🕑 1 minute read. January 15, 2020</span><p>Tutorial on setting up kaggle, to use with Google Colab</p></article></li><li><article><h1><a href="/posts/2020-01-14-Converting-between-PIL-NumPy">Converting between image and NumPy array</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. January 14, 2020</span><p>Short code snippet for converting between PIL image and NumPy arrays.</p></article></li><li><article><h1><a href="/posts/2019-12-22-Fake-News-Detector">Building a Fake News Detector with Turicreate</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/colab">Colab</a></li><li><a href="/tags/swiftui">SwiftUI</a></li><li><a href="/tags/turicreate">Turicreate</a></li></ul><span>🕑 7 minute read. December 22, 2019</span><p>In this tutorial we will build a fake news detecting app from scratch, using Turicreate for the machine learning model and SwiftUI for building the app</p></article></li><li><article><h1><a href="/posts/2019-12-16-TensorFlow-Polynomial-Regression">Polynomial Regression Using TensorFlow</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 17 minute read. December 16, 2019</span><p>Polynomial regression using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-10-TensorFlow-Model-Prediction">Making Predictions using Image Classifier (TensorFlow)</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/codesnippet">Code-Snippet</a></li></ul><span>🕑 1 minute read. December 10, 2019</span><p>Making predictions for image classification models built using TensorFlow</p></article></li><li><article><h1><a href="/posts/2019-12-08-Image-Classifier-Tensorflow">Creating a Custom Image Classifier using Tensorflow 2.x and Keras for Detecting Malaria</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/tensorflow">Tensorflow</a></li><li><a href="/tags/colab">Colab</a></li></ul><span>🕑 4 minute read. December 8, 2019</span><p>Tutorial on creating an image classifier model using TensorFlow which detects malaria</p></article></li><li><article><h1><a href="/posts/2019-12-08-Splitting-Zips">Splitting ZIPs into Multiple Parts</a></h1><ul class="tag-list"><li><a href="/tags/codesnippet">Code-Snippet</a></li><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 1 minute read. December 8, 2019</span><p>Short code snippet for splitting zips.</p></article></li><li><article><h1><a href="/posts/2019-12-04-Google-Teachable-Machines">Image Classifier With Teachable Machines</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li></ul><span>🕑 2 minute read. December 4, 2019</span><p>Tutorial on creating a custom image classifier quickly with Google Teachanle Machines</p></article></li><li><article><h1><a href="/posts/2019-05-05-Custom-Snowboard-Anemone-Theme">Creating your own custom theme for Snowboard or Anemone</a></h1><ul class="tag-list"><li><a href="/tags/tutorial">Tutorial</a></li><li><a href="/tags/jailbreak">Jailbreak</a></li><li><a href="/tags/designing">Designing</a></li><li><a href="/tags/snowboard">Snowboard</a></li><li><a href="/tags/anemone">Anemone</a></li></ul><span>🕑 5 minute read. May 5, 2019</span><p>Tutorial on creating your own custom theme for Snowboard or Anemone</p></article></li></ul></div><footer><p>Made with ❤️ using <a href="https://github.com/johnsundell/publish">Publish</a></p><p><a href="/feed.rss">RSS feed</a></p></footer></body></html>
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