Compiling AutoDock Vina on iOS

Why? Because I can.

Installing makedepend

makedepend is a Unix tool used to generate dependencies of C source files. Most modern programs do not use this anymore, but then again AutoDock Vina's source code hasn't been changed since 2011. The first hurdle came when I saw that there was no makedepend command, neither was there any package on any development repository for iOS. So, I tracked down the original source code for makedepend (https://github.com/DerellLicht/makedepend). According to the repository this is actually the source code for the makedepend utility that came with some XWindows distribution back around Y2K. I am pretty sure there is a problem with my current compiler configuration because I had to manually edit the Makefile to provide the path to the iOS SDKs using the -isysroot flag.

Editing the Makefile

Original Makefile ( I used the provided mac Makefile base )

@@ -83,11 +83,11 @@ include ../../makefile_common -

Updating the Source Code

Of course since Boost 1.41 many things have been added and deprecated, that is why I had to edit the source code to make it work with version 1.68

Error 1 - No Matching Constructor

../../../src/main/main.cpp:50:9: error: no matching constructor for initialization of 'path' (aka 'boost::filesystem::path')
 return path(str, boost::filesystem::native);
@@ -98,7 +98,7 @@ return path(str, boost::filesystem::native);
 return path(str)
 
 
-Error 2 - No Member Named 'nativefilestring'
+Error 2 - No Member Named 'nativefilestring'
 
 ../../../src/main/main.cpp:665:57: error: no member named 'native_file_string' in 'boost::filesystem::path'
                 std::cerr << "\n\nError: could not open \"" << e.name.native_file_string() << "\" for " << (e.in ? "reading" : "writing") << ".\n";
@@ -111,15 +111,15 @@ return path(str, boost::filesystem::native);
 
 Turns out native_file_string was deprecated in Boost 1.57 and replaced with just string
 
-Error 3 - Library Not Found
+Error 3 - Library Not Found
 
 This one still boggles me because there was no reason for it to not work, as a workaround I downloaded the DEB, extracted it and used that path for compiling.
 
-Error 4 - No Member Named 'nativefilestring' Again.
+Error 4 - No Member Named 'nativefilestring' Again.
 
 But, this time in another file and I quickly fixed it
 
-Moment of Truth
+Moment of Truth
 
 Obviously it was working on my iPad, but would it work on another device? I transferred the compiled binary and 
 
-- 
cgit v1.2.3


From 9e620084e57378952c1a7f8e0a772ebebd18932b Mon Sep 17 00:00:00 2001
From: Navan Chauhan 
Date: Wed, 27 Mar 2024 20:35:09 -0600
Subject: quick fix

---
 docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

(limited to 'docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html')

diff --git a/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html b/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
index 1aed192..7efd518 100644
--- a/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
+++ b/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
@@ -6,13 +6,13 @@
     
     
     
-    id="compiling-autodock-vina-on-ios">Compiling AutoDock Vina on iOS
+    Compiling AutoDock Vina on iOS
     
     
     
-    Compiling AutoDock Vina on iOS" />
-    Compiling AutoDock Vina on iOS" />
+    
+    
     
     
     
-- 
cgit v1.2.3


From 01ff93c9c16867216f2d249664803860e1d6d5eb Mon Sep 17 00:00:00 2001
From: Navan Chauhan 
Date: Wed, 27 Mar 2024 22:49:40 -0600
Subject: generate new theme

---
 .../2020-06-02-Compiling-AutoDock-Vina-on-iOS.html | 55 +++++++++++++++-------
 1 file changed, 37 insertions(+), 18 deletions(-)

(limited to 'docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html')

diff --git a/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html b/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
index 7efd518..c4521f3 100644
--- a/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
+++ b/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
@@ -2,14 +2,26 @@
 
 
     
-    
+    
+    
+    
+
+    Compiling AutoDock Vina on iOS
+
+    
+
+    
+
+    
+
     
     
     
-    Compiling AutoDock Vina on iOS
     
     
-    
     
     
     
@@ -29,21 +41,27 @@
     
     
 
-
-    
-|
-home |
-about/links |
-posts |
-3D designs |
-
-
-RSS Feed |
-
-
+
+    
+    
+        
+            Navan
+            Something Funny
+        
+
+        
+            about/links
+            posts
+            3D designs
+            RSS Feed
+            colophon
+        
+        © 2024. All rights reserved.
+    
+
+    
     
-
-
+	
 	Compiling AutoDock Vina on iOS
 
 Why? Because I can.
@@ -127,14 +145,15 @@ return path(str, boost::filesystem::native);
 
 The package is available on my repository and only depends on boost. ( Both, Vina and Vina-Split are part of the package)
 
+	
 	If you have scrolled this far, consider subscribing to my mailing list here. You can subscribe to either a specific type of post you are interested in, or subscribe to everything with the "Everything" list.
 	
 	
 	    
 	
-
 
+    
     
         
 
-- 
cgit v1.2.3


From de19543d7fb44d343b052dc9b34ede78620c4a46 Mon Sep 17 00:00:00 2001
From: Navan Chauhan 
Date: Wed, 27 Mar 2024 23:36:55 -0600
Subject: Generate

---
 .../posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html | 16 ++++++++++++++--
 1 file changed, 14 insertions(+), 2 deletions(-)

(limited to 'docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html')

diff --git a/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html b/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
index c4521f3..a8e55cb 100644
--- a/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
+++ b/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
@@ -46,7 +46,7 @@
     
         
             Navan
-            Something Funny
+            Alea iacta est.
         
 
         
@@ -56,9 +56,21 @@
             RSS Feed
             colophon
         
-        © 2024. All rights reserved.
+        
© 2019-2024. Navan Chauhan 
 RSS
     
 
+
+
     
     
 	
-- 
cgit v1.2.3


From a982ceab0b45609991179b3020a00260eed6f798 Mon Sep 17 00:00:00 2001
From: Navan Chauhan 
Date: Wed, 27 Mar 2024 23:45:59 -0600
Subject: css

---
 docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html | 1 +
 1 file changed, 1 insertion(+)

(limited to 'docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html')

diff --git a/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html b/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
index a8e55cb..814ce86 100644
--- a/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
+++ b/docs/posts/2020-06-02-Compiling-AutoDock-Vina-on-iOS.html
@@ -5,6 +5,7 @@
     
     
     
+    
 
     Compiling AutoDock Vina on iOS
 
-- 
cgit v1.2.3