<!DOCTYPE html> <html lang="en"> <head> <link rel="stylesheet" href="/assets/main.css" /> <link rel="stylesheet" href="/assets/sakura.css" /> <meta charset="utf-8"> <meta name="viewport" content="width=device-width, initial-scale=1.0"> <title>Hey - Post</title> <meta name="og:site_name" content="Navan Chauhan" /> <link rel="canonical" href="https://navanchauhan.github.io/" /> <meta name="twitter:url" content="https://navanchauhan.github.io/" /> <meta name="og:url" content="https://navanchauhan.github.io/" /> <meta name="twitter:title" content="Hey" /> <meta name="og:title" content="Hey" /> <meta name="description" content="Welcome to my personal fragment of the internet." /> <meta name="twitter:description" content="Welcome to my personal fragment of the internet. Majority of the posts should be complete." /> <meta name="og:description" content="Welcome to my personal fragment of the internet." /> <meta name="twitter:card" content="summary" /> <meta name="viewport" content="width=device-width, initial-scale=1.0" /> <link rel="shortcut icon" href="/images/favicon.png" type="image/png" /> <link rel="alternate" href="/feed.rss" type="application/rss+xml" title="Subscribe to Navan Chauhan" /> <meta name="twitter:image" content="https://navanchauhan.github.io/images/logo.png" /> <meta name="og:image" content="https://navanchauhan.github.io/images/logo.png" /> <link rel="manifest" href="manifest.json" /> <meta name="google-site-verification" content="LVeSZxz-QskhbEjHxOi7-BM5dDxTg53x2TwrjFxfL0k" /> <script async src="//gc.zgo.at/count.js" data-goatcounter="https://navanchauhan.goatcounter.com/count"></script> </head> <body> <nav style="display: block;"> | <a href="/">home</a> | <a href="/about/">about/links</a> | <a href="/posts/">posts</a> | <a href="/publications/">publications</a> | <a href="/repo/">iOS repo</a> | <a href="/feed.rss">RSS Feed</a> | </nav> <main> <h1>Fixing X11 Error on macOS Catalina for AmberTools 18/19</h1> <p>I was trying to install AmberTools on my macOS Catalina Installation. Running <code>./configure -macAccelerate clang</code> gave me an error that it could not find X11 libraries, even though <code>locate libXt</code> showed that my installation was correct.</p> <p>Error:</p> <pre><code>Could not find the X11 libraries; you may need to edit config.h to set the XHOME and XLIBS variables. Error: The X11 libraries are not in the usual location ! To search for them try the command: locate libXt On new Fedora OS's install the libXt-devel libXext-devel libX11-devel libICE-devel libSM-devel packages. On old Fedora OS's install the xorg-x11-devel package. On RedHat OS's install the XFree86-devel package. On Ubuntu OS's install the xorg-dev and xserver-xorg packages. ...more info for various linuxes at ambermd.org/ubuntu.html To build Amber without XLEaP, re-run configure with '-noX11: ./configure -noX11 --with-python /usr/local/bin/python3 -macAccelerate clang Configure failed due to the errors above! </code></pre> <p>I searched on Google for a solution. Sadly, there was not even a single thread which had a solution about this error.</p> <h2>The Fix</h2> <p>Simply reinstalling XQuartz using homebrew fixed the error <code>brew cask reinstall xquartz</code></p> <p>If you do not have XQuartz installed, you need to run <code>brew cask install xquartz</code></p> </main> <script src="assets/manup.min.js"></script> <script src="/pwabuilder-sw-register.js"></script> </body> </html>